Index

_

_ElementBase (class in emulsim.elements.base)

A

ActiveParticleActor (class in emulsim.actors.autonomous.active_particles) ActorBase (class in emulsim.actors.base) add_actor() (Simulation method) add_amount() (FieldElementBase method) (MeanfieldElement method) (ReservoirElement method) (ScalarBoundaryFieldElement method) (ScalarFieldElement method) add_amounts() (FieldCollectionElement method)

add_element() (State method) amounts (FieldCollectionElement property) (MulticomponentDroplet property) (MulticomponentDropletsElement property) ArrayCollectionElementBase (class in emulsim.elements.base) ArrayElementBase (class in emulsim.elements.base) ArrowsElement (class in emulsim.elements.points) average_concentration (FieldElementBase property) axis (ScalarBoundaryFieldElement property)

B

BoxActor (class in emulsim.actors.autonomous.box)

BrownianMotionActor (class in emulsim.actors.autonomous.brownian_motion) bulk_coordinates (ScalarBoundaryFieldElement attribute)

C

check_coupling_dim() (FieldElementBase method) (MeanfieldElement method) (ScalarBoundaryFieldElement method) check_data() (MulticomponentDroplet method) chis_full (MulticomponentDropletActor property) CoalescenceDropletActor (class in emulsim.actors.autonomous.coalescence) CollectionPDEActor (class in emulsim.actors.autonomous.fields) concentration (MeanfieldElement property) (ReservoirElement property)

copy() (ActorBase method) (CollectionPDEActor method) (FieldCollectionElement method) (FunctionActor method) (NumbaFunctionActor method) (ScalarFieldElement method) (ScalarPDEActor method) (Simulation method) (State method)

D

data (FieldCollectionElement property) (MulticomponentDroplet attribute) (ScalarFieldElement property) (SphericalDropletsElement attribute) (State attribute) data_bounds (MulticomponentDroplet property) degrees_of_freedom (ArrayCollectionElementBase property) (ArrayElementBase property) (DictElementBase property) (FieldCollectionElement property) (MeanfieldElement property) (ObjectElementBase property) (ReservoirElement property) (ScalarFieldElement property) (State property)

diagnostics (ActorBase attribute) DictElementBase (class in emulsim.elements.base) DiffusionActor (class in emulsim.actors.autonomous.fields) dim (ReservoirElement attribute) (ShellSectors property) directions (ArrowsElement property) droplet_class (MulticomponentDropletsElement attribute) (SphericalDropletsElement attribute) droplet_count (SphericalDropletsElement property) droplet_tracks (DropletElementTracker attribute) DropletElementTracker (class in emulsim.trackers) DropletNucleationActor (class in emulsim.actors.coupling.nucleation) dt_default (SimulationSolver attribute) dt_max (SimulationSolver attribute) dt_min (SimulationSolver attribute)

E

element_classes (ActiveParticleActor attribute) (ActorBase attribute) (BoxActor attribute) (BrownianMotionActor attribute) (CoalescenceDropletActor attribute) (CollectionPDEActor attribute) (DropletNucleationActor attribute) (EmittersActor attribute) (FieldBoundaryExchangeActor attribute) (FieldCouplingActor attribute) (FieldExchangeActor attribute) (FunctionActor attribute) (LocalReactionsActor attribute) (MulticomponentDropletActor attribute) (NumbaFunctionActor attribute) (PointDropletActor attribute) (ScalarPDEActor attribute) (SphericalDropletActor attribute) elements (State property) EmittersActor (class in emulsim.actors.autonomous.emitters) empty() (SphericalDropletsElement class method) emulsim module emulsim.actors module emulsim.actors.autonomous module emulsim.actors.autonomous.active_particles module emulsim.actors.autonomous.box module emulsim.actors.autonomous.brownian_motion module emulsim.actors.autonomous.coalescence module emulsim.actors.autonomous.emitters module emulsim.actors.autonomous.fields module emulsim.actors.base module emulsim.actors.coupling module emulsim.actors.coupling.fields module emulsim.actors.coupling.multicomponent_droplet module emulsim.actors.coupling.nucleation module emulsim.actors.coupling.point_droplet module emulsim.actors.coupling.spherical_droplet module emulsim.actors.function module

emulsim.elements module emulsim.elements.base module emulsim.elements.fields module emulsim.elements.multicomponent_droplets module emulsim.elements.points module emulsim.elements.spherical_droplets module emulsim.simulation module emulsim.state module emulsim.trackers module emulsions (DropletElementTracker attribute) environment variable PYTHONPATH estimate_dt() (ActiveParticleActor method) (ActorBase method) (BoxActor method) (BrownianMotionActor method) (DiffusionActor method) (DropletNucleationActor method) (EmittersActor method) (LocalReactionsActor method) (PointDropletActor method) (ReactionDiffusionActor method) (Simulation method) (SphericalDropletActor method) estimate_nucleation_count() (DropletNucleationActor method) evolve() (ActiveParticleActor method) (ActorBase method) (BoxActor method) (BrownianMotionActor method) (CoalescenceDropletActor method) (CollectionPDEActor method) (DropletNucleationActor method) (EmittersActor method) (FieldBoundaryExchangeActor method) (FieldCouplingActor method) (FieldExchangeActor method) (FunctionActor method) (LocalReactionsActor method) (MulticomponentDropletActor method) (NumbaFunctionActor method) (PointDropletActor method) (ScalarPDEActor method) (Simulation method) (SphericalDropletActor method)

F

field (FieldCollectionElement property) (MeanfieldElement property) (ScalarFieldElement property) FieldBoundaryExchangeActor (class in emulsim.actors.coupling.fields) FieldCollectionElement (class in emulsim.elements.fields) FieldCouplingActor (class in emulsim.actors.coupling.fields) FieldElementBase (class in emulsim.elements.fields) FieldExchangeActor (class in emulsim.actors.coupling.fields) FieldTracker (class in emulsim.trackers) fill_with_zeros() (in module emulsim.actors.autonomous.coalescence) finalize() (DropletElementTracker method) (FieldTracker method) (TrajectoryTracker method) find_actors() (in module emulsim.actors.base)

from_bulk_grid() (ScalarBoundaryFieldElement class method) from_composition() (MulticomponentDroplet class method) from_data() (State class method) from_dictlist() (ShellCollection class method) from_droplets() (SphericalDropletsElement class method) from_field() (MeanfieldElement class method) (ScalarBoundaryFieldElement class method) (ScalarFieldElement class method) from_fields() (FieldCollectionElement class method) from_grid() (BoxActor class method) from_linear_reactions() (MulticomponentDropletActor class method) from_position_direction() (ArrowsElement class method) from_position_random_direction() (ArrowsElement class method) from_random() (SphericalDropletsElement class method) FunctionActor (class in emulsim.actors.function)

G

generate() (ShellCollection class method) (ShellSectors class method) get_area_weights() (PointsOnSphere method) get_concentration() (FieldElementBase method) (MeanfieldElement method) (ReservoirElement method) (ScalarFieldElement method) get_concentrations() (FieldCollectionElement method) get_distance_matrix() (PointsOnSphere method) get_droplet_fractions() (MulticomponentDropletActor method) get_dtype() (MulticomponentDroplet class method) get_equilibrium_concentrations() (PointDropletActor method) (SphericalDropletActor method) get_flux_outside() (PointDropletActor method) (SphericalDropletActor method)

get_graph() (Simulation method) get_index() (State method) get_interacting_elements() (Simulation method) get_mean_separation() (PointsOnSphere method) get_quantities() (State method) get_quantity() (State method) get_shell() (ShellCollection method) (ShellSectors method) get_spherical_polygon_area() (in module emulsim.actors.coupling.spherical_droplet) get_thermodynamic_quantity() (MulticomponentDropletActor method) get_total_quantity() (State method) grid (FieldCollectionElement property) (FieldElementBase property) (MeanfieldElement attribute) (ScalarFieldElement property) (State property)

H

handle() (DropletElementTracker method) (FieldTracker method) (TrajectoryTracker method)

haversine_distance() (in module emulsim.actors.coupling.spherical_droplet)

I

info (ActorBase property) (CollectionPDEActor property) (ScalarPDEActor property) (Simulation property) (Trajectory property)

initialize() (DropletElementTracker method) (FieldTracker method) (TrajectoryTracker method) items() (State method)

K

keys() (State method)

L

LocalReactionsActor (class in emulsim.actors.autonomous.fields)

M

make_add_amount_compiled() (FieldElementBase method) (MeanfieldElement method) (ReservoirElement method) (ScalarBoundaryFieldElement method) (ScalarFieldElement method) make_add_amounts_compiled() (FieldCollectionElement method) make_evolver_numba() (ActiveParticleActor method) (ActorBase method) (BoxActor method) (BrownianMotionActor method) (CoalescenceDropletActor method) (CollectionPDEActor method) (DropletNucleationActor method) (EmittersActor method) (FieldBoundaryExchangeActor method) (FieldCouplingActor method) (FieldExchangeActor method) (LocalReactionsActor method) (MulticomponentDropletActor method) (NumbaFunctionActor method) (PointDropletActor method) (ScalarPDEActor method) (Simulation method) (SphericalDropletActor method) make_get_concentration_compiled() (FieldElementBase method) (MeanfieldElement method) (ReservoirElement method) (ScalarFieldElement method) make_get_concentrations_compiled() (FieldCollectionElement method) make_shell_data_getter() (ShellCollection method) (ShellSectors method) make_stepper() (SimulationSolver method) make_uniform() (PointsOnSphere class method)

max_sector_count (ShellCollection attribute) MeanfieldActor (class in emulsim.actors.autonomous.fields) MeanfieldElement (class in emulsim.elements.fields) module emulsim emulsim.actors emulsim.actors.autonomous emulsim.actors.autonomous.active_particles emulsim.actors.autonomous.box emulsim.actors.autonomous.brownian_motion emulsim.actors.autonomous.coalescence emulsim.actors.autonomous.emitters emulsim.actors.autonomous.fields emulsim.actors.base emulsim.actors.coupling emulsim.actors.coupling.fields emulsim.actors.coupling.multicomponent_droplet emulsim.actors.coupling.nucleation emulsim.actors.coupling.point_droplet emulsim.actors.coupling.spherical_droplet emulsim.actors.function emulsim.elements emulsim.elements.base emulsim.elements.fields emulsim.elements.multicomponent_droplets emulsim.elements.points emulsim.elements.spherical_droplets emulsim.simulation emulsim.state emulsim.trackers MulticomponentDroplet (class in emulsim.elements.multicomponent_droplets) MulticomponentDropletActor (class in emulsim.actors.coupling.multicomponent_droplet) MulticomponentDropletsElement (class in emulsim.elements.multicomponent_droplets)

N

NoData (class in emulsim.elements.base) nucleation_rate() (DropletNucleationActor method) num_comps (MulticomponentDroplet property) (MulticomponentDropletsElement property)

num_elements (ActorBase property) num_fields (FieldCollectionElement property) NumbaFunctionActor (class in emulsim.actors.function)

O

ObjectElementBase (class in emulsim.elements.base)

ol_fill_with_zeros() (in module emulsim.actors.autonomous.coalescence)

P

parameters_default (FieldCollectionElement attribute) (MeanfieldElement attribute) (PointsElement attribute) (ScalarBoundaryFieldElement attribute) (ScalarFieldElement attribute) (SphericalDropletsElement attribute) (State attribute) pde (ScalarPDEActor attribute) phi_solvent (MulticomponentDroplet property) phis (MulticomponentDroplet property) (MulticomponentDropletsElement property) plot() (ArrowsElement method) (FieldCollectionElement method) (FieldElementBase method) (MeanfieldElement method) (MulticomponentDropletsElement method) (PointsElement method) (ReservoirElement method) (ScalarBoundaryFieldElement method) (ScalarFieldElement method) (SphericalDropletsElement method) (State method)

plot_as_graph() (Simulation method) plot_interacting_elements() (Simulation method) plot_interactive() (State method) plot_shell_points() (SphericalDropletActor method) PointDropletActor (class in emulsim.actors.coupling.point_droplet) PointsElement (class in emulsim.elements.points) PointsOnSphere (class in emulsim.actors.coupling.spherical_droplet) positions (PointsElement property) PYTHONPATH

R

reaction_rate_tolerance (SphericalDropletActor attribute) ReactionDiffusionActor (class in emulsim.actors.autonomous.fields)

ReservoirElement (class in emulsim.elements.fields) run() (Simulation method)

S

ScalarBoundaryFieldElement (class in emulsim.elements.fields) ScalarFieldElement (class in emulsim.elements.fields) ScalarPDEActor (class in emulsim.actors.autonomous.fields) sector_count (ShellSectors property) set_bounds() (FieldElementBase method) ShellCollection (class in emulsim.actors.coupling.spherical_droplet) ShellSectors (class in emulsim.actors.coupling.spherical_droplet)

Simulation (class in emulsim.simulation) SimulationSolver (class in emulsim.simulation) SolventFractionError SphericalDropletActor (class in emulsim.actors.coupling.spherical_droplet) SphericalDropletsElement (class in emulsim.elements.spherical_droplets) State (class in emulsim.state) supports_elements() (ActorBase class method)

T

times (Trajectory attribute) total_amount (FieldCollectionElement property) (FieldElementBase property) (MeanfieldElement property) (MulticomponentDropletsElement property) (ScalarFieldElement property) (SphericalDropletsElement property)

Trajectory (class in emulsim.trackers) TrajectoryTracker (class in emulsim.trackers)

V

values() (State method)

W

write_to_xyz() (PointsOnSphere method)